Publications

• Wunder, T., Eulitz, L., Kramer, L., Mohd Ali, Z., Ostermeier, M., Leu, C., Szulc, B., Holzner, L.J., Fechter, J., Padovani, F., Brandt, B., Girr, P., Tsong Teh, J., Mühlbauer, S., Sotos, C., Angstenberger, M., Mackinder, L.C.M., Schmoller, K.M., Rädler, J.O., Nickelsen, J., de Vries, J. & Kunz, H.-H. (2025), Conserved and Lineage-Specific Roles of KEA-Mediated Ion Homeostasis in Chlamydomonas, bioRixv

• Padovani, F.*, Stegmaier, T.*, Mairhörmann, B. & Schmoller, K.M. (2025), Analysis of Multidimensional Microscopy Data Using Cell-ACDC, JoVE, 225, e68954

• Kukhtevich, I.V.*, Persson, S.*, Padovani, F., Schneider, R., Cvijovic, M.** & Schmoller, K.M.** (2025) The origin of septin ring size control in budding yeast, The EMBO Journal

• Thoma, F., Rathberger, R., Padovani, F., Hörl, D., Schmoller, K.M. & Osman, C. (2025) Local Mitochondrial Physiology Defined by mtDNA Quality Guides Purifying Selection, bioRxiv

• Dengler, L., Padovani, F., Lemke, B., Brugger, R., Westermann, B., Maček, B., Schmoller, K.M. & Ewald, J.C. (2025) When mitochondria fall apart: Unbalanced mitochondrial segregation triggers loss of mtDNA in the absence of mitochondrial fusion, bioRxiv

• Al-Refaie, N. Padovani, F., Schmoller, K.M. & Cabianca, D.S. (2025) Localization and expression dynamics of an RNA Pol I core subunit in response to fasting in C. elegans, microPublication Biology, 10.17912/micropub.biology.001472

• Deng, J., Swift, L., Zaman, M., Sharma, A., Bureik, D., Padovani, F., Benedikt, A., Shahhosseini, F., Jaiswal, A., Brideau, C., Grewal, S., Schmoller, K.M., Colarusso, P. & Shutt, T.E. (2025) A novel genetic fluorescent reporter to visualize mitochondrial nucleoids, bioRxiv

• Padovani, F., Čavka, I., Rodrigues Neves, A.R., Piñeiro López, C., Al-Refaie, N., Bolcato, L., Chatzitheodoridou, D., Chadha, Y., Su, X.A., Lengefeld, J., Cabianca, D.S., Köhler, S. & Schmoller, K.M. (2024) SpotMAX: a generalist framework for multi-dimensional automatic spot detection and quantification, bioRxiv

• Chadha, Y., Kukhtevich, I.V., Padovani, F., Schneider, R. & Schmoller, K.M. (2024) Single-cell imaging reveals a key role of Bck2 in budding yeast cell size adaptation to nutrient challenges, bioRxiv

• Al-Refaie, N., Padovani, F., Hornung, J., Pudelko, L., Binando, F., Fabregat, C., Zhao, Q., Towbin, B.D., Sarinay Cenik, E., Stroustrup, N., Padeken, J., Schmoller, K.M. & Cabianca, D.S. (2024) Fasting shapes chromatin architecture through an mTOR/RNA Pol 1 axis, Nature Cell Biology, https://doi.org/10.1038/s41556-024-01512-w

• Chatzitheodoridou, D., Bureik, D., Padovani, F., Nadimpalli, K.V. & Schmoller., K.M. (2024) Decoupled transcript and protein concentrations ensure histone homeostasis in different nutrients, The EMBO Journal, https://doi.org/10.1038/s44318-024-00227-w

• Roussou, R., Metzler, D., Padovani, F., Thoma, F., Schwarz, R., Shraiman, B., Schmoller, K.M. & Osman, C. (2024) Real-time assessment of mitochondrial DNA heteroplasmy dynamics at the single-cell level, The EMBO Journal, https://doi.org/10.1038/s44318-024-00183-5

• Vitacolonna, M., Bruch, R., Agaçi, A., Nürnberg, E., Cesetti, T., Keller, F., Padovani, F., Sauer, S., Schmoller, K.M., Reischl, M., Hafner, M. & Rudolf, R. (2024) A multiparametric analysis including single-cell and subcellular feature assessment reveals differential behavior of spheroid cultures on distinct ultra-low attachment plates types, Frontiers in Bioengineering and Biotechnology, 12, 1422235

• Seel, A., Padovani, F., Mayer, M., Finster, A., Bureik, D., Thoma, F., Osman, C., Klecker, T. & Schmoller, K.M. (2023) Regulation with cell size ensures mitochondrial DNA homeostasis during cell growth, Nature Structural & Molecular Biology, https://doi.org/10.1038/s41594-023-01091-8

• Mairhörmann, B., Padovani, F. & Schmoller., K.M. (2023) Zugängliche KI-Algorithmen für bessere Zellmikroskopie, BIOspektrum. 04.23

• Freitag, M., Jaklin, S., Padovani, F., Radzichevici, E., Zernia, S., Schmoller, K.M. & Stigler, J. (2022) Single-molecule experiments reveal the elbow as an essential folding guide in SMC coiled coil arms, Biophysical Journal, 121, 4702-4713

• Padovani, F., Mairhörmann, B., Falter-Braun, P., Lengefeld, J. & Schmoller, K.M. (2022) Segmentation, tracking and cell cycle analysis of live-cell imaging data with Cell-ACDC, BMC Biology, 20, 1-18

• Kukhtevich, I.V., Lohrberg, N., Padovani, F., Schneider, R. & K.M. Schmoller (2020) Cell size sets the diameter of the budding yeast contractile ring, Nature Communications. 11: 1-15